Credits

Contribution credits

Elizabeth Parker [1❋], Kathryn Billane [2❋], James Pitman [3], David Hopkins [5], Alex Williams [5], Heather Walker [4] Duncan Cameron [6] (2022).

❋ EP and KB are grateful to the University of Sheffield for “Unleash your data and software funding” that facilitated documentation of this workflow

  1. EP planned and coordinated the project, wrote the R codes, contributed to writing, created mermaid workflow diagram, authored and maintained the website
  2. KB developed E. coli protocols, contributed to writing and collating documentation for LC-ESI-MS
  3. JP contributed to writing DI-ESI-MS documents, tested workflow, contributed to R codes
  4. HW contributed protocols and guides, tested workflow, contributed to project planning, contributed example data sets
  5. DH, AW tested workflows and R codes, contributed to project planning and aims
  6. DC established aims of the project, supported the project with resources and oversaw collaboration

Acknowledgements

With thanks to Harry Wright, Rachel George, Sophia van Mourik and Erika Hansson for their feedback on the content.

Many thanks to RSE Sheffield for their help and guidance in sharing the workflow.

Website Theme

The website theme was adapted from RSE Sheffield’s github training course. The workshop materials website itself is based on the hugo-theme-learn and further configurations were inspired by Maëlle Salmon’s course site on Scientific blogging with R Markdown.